Machine Learning

• Regression with 2-means clustering Annoy (non-scientific)

  So apparently Annoy is now splitting points by using the centroids of 2 means clustering. It is claimed that it provides better results for ANN search, however, how does this impact regression? Purely out of curiosity, I plugged a new point splitting function and generated a new set of points.

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• Regression with Annoy (cont’d)

  After a year and half, a lot of things changed, and annoy also changed the splitting strategy too. However, I always wanted to do a proper follow up to the original post, where I compared boosting to Annoy. I still remember the reason I started that (flawed) experiment was because I found boosting easy.

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• Quick experiment, boosting vs annoy

  While following through the Statistical Learning course, I came across this part on doing regression with boosting. Then reading through the material, and going through it makes me wonder, the same method may be adapted to Erik Bernhardsson‘s annoy algorithm.

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• Further Hack on the Multi-Dimensional Approximate Neighbour Search

  Traversing a tree structure often involves writing a recursive function. However, Python isn’t the best language for this purpose. Therefore I started flattening the tree into a key-value dictonary structure. Logically it is still a tree, but it is physically stored as a dictionary. Therefore it is now easier to write a simple loop to traverse it.

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• Approximate Neighbour Search in Multiple Dimensions

  In the previous post, I re-implemented Annoy in 2D with some linear algebra maths. Then I spent some time going through some tutorial on vectors, and expanded the script to handle data in 3D and more. So instead of finding gradient, the perpendicular line in the middle of two points, I construct a plane, and find the distance between it and points to construct the tree.

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• Re-implementing Approximate Nearest Neighbour Search

  Recently I switched my search code to Annoy because the input dataset is huge (7.5mil records with 20k dictionary count). It wasn’t without issues though, however I would probably talk about it next time. In order to figure out what each parameters meant, I spent some time watching through the talk given by the author @fulhack.

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• Random notes on Pandas and Scikit-learn

  So I first heard about Panda probably a year ago when I was in my previous job. It looked nice, but I didn’t really get the chance to use it. So practically it is a library that makes data looks like a mix of relational database table and excel sheet. It is easy to do query with it, and provides a way to process it fast if you know how to do it properly (no, I don’t, so I cheated).

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Random Posts

• Evaluating logical statements

  Often times one would have to write code to evaluate logical statements. For example, given statement p and q, what is p implies q? As there’s no operator for implication in PHP, one would have to rewrite the statement that consists only in NOT (!), AND (&&) and OR (||) operators. When there are a huge load of these statements, code can be difficult to read.

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• Processing JSON with dask.bag

  Often times, I am dealing with JSONL files, though panda’s DataFrame is great (and blaze to certain extend), however it is offering too much for the job. Most of the received data is in the form of structured text and I do all sorts of work with them. For example checking for consistency, doing replace based on values of other columns, stripping whitespace etc.

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• Further setup of development environment

  After publishing the previous note on setting up my development environment, I find myself spending more time in the CLI (usually via SSH from host). Then I find myself not needing all the GUI apps in a standard Ubuntu desktop environment so I went ahead and set up a new environment based on Ubuntu Quantal server edition beta-1. For some reason my network stopped working and didn’t really want to spend time finding out the cause, so I reinstalled everything again today using the final installer, as well as the updated Virtualbox 4.2.6.

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• Maintaining State with YUI Event

  When one start writting Javascript in patterns like the module pattern, then sooner or later he would want to maintain the state when an event handler is called. The reason I am still using YUI to handle my event handling code is because I like how state can be maintained.

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• Setting Up Virtuoso for Redland Under Ubuntu

  Just a quick update to the previous post, the virtuoso storage engine works with redland provided the required packages are properly installed (yes, yes, yes, I know I haven’t release my PHP OO wrapper for Redland). Now that the package is installed, we need to do some configuration so that Redland can use it.

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